Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798089.1_cds_XP_016458531.1_5182
CDS Infomation

[gene=LOC107782189] [db_xref=GeneID:107782189] [protein=phosphatidylinositol 4-phosphate 5-kinase 6-like] [protein_id=XP_016458531.1] [location=complement(join(179685..179973,180057..180135,180335..180465,180549..180742,180827..180943,181049..181214,181295..181462,181911..183070))] [gbkey=CDS]
Sequence

ATGAAGGCTTGGGAGGCAACCGTTAAGAAAACACAGGCAGTAGCGAGGAAACGAGCCAAC
ACAATATTTGGTACCTATGGACCATCTCAGGCTGAGGAAGAGATTATTGATCAACTAGAT
CCAGAAAATGACAACGAGGGGCACGCTAGTGGAGAAATTTACCATTCGGAGAGGTTCCTT
CCTAATGGAGATTACTATAGTGGCTATTGGGTCGATAATTTCCCCCATGGACACGGCAAA
TATTGGTGGACTGATGGGTGCATGTATTTAGGTGATTGGTTTCGAGGCAAAAAGATGGGA
AAAGGTACATTTAGTTGGCCCTCTGGAGCTATGTATGAGGGGAATTTCAAGAGTGGATAT
ATGGATGGCGAAGGAACGTATATGGCGCCTAATGGGGACTCATTTAGAGGTTCTTGGGTG
ATGAATTTGAAACATGGACATGGTGTTAAGGAATACGCGAATGGAGATTGTTATGATGGG
GAATGGAGTCGCGGATTACAAGAAGGACATGGTAAGTATACATGGAAGAATGGGAATTGC
TATGTTGGTGAATGGAAGAATGGTGTTATATGTGGGAAAGGTAAGATGTGTTGGACAAAT
GAGAATGTATATGAAGGGAATTGGGAAGATGGAGTGCCTAAGGGAAATGGGACATTTAGA
TGGGCTGATGGGAGCTTGTATATTGGGAATTGGAGTAAAGAACCAAATGAACATAATGGG
ACATTTTATCCATCTGGATCATTGTTACAAGGAGGAAACCTTGATTGGGATCCTCAGCAG
GTTTATTATACTGATTTGATGGAATGTACCATTTGTCCAAATGAGAAGGTTTCAATATTG
CCTTCTCAGAAAAAGCTGGCAGTTTGGAGGTCTGCTAAGGCGGCAGAAAACAACGTTCGG
CCAAGGAGGATGTCCGTAGATGGTCGAATAGATGCAGCGCCTGTAGATAGGGAATTTGGG
CGAACGCGCTTATCAGATTGTGCAGGAACACCTCCAAATATTTCTTATTTAGATGATGCC
ATAGCTGGTTCACAGGAACATGATGGGTATATTAGAGGGAGCCCCATTAGACTTCCTAAG
TCAGCAAAAAGGCAAGGAGAGACTATTTCCAAAGGGCATAAAAATTATGAGCTTATGCTC
AATTTGCAGTTGGGAATCAGGCATTCAGTAGGAAGGCCAGGACCTGCTCCATCACTTGAT
CTCAAGTCTTCAGCATTTGATCCCAAAGAGAAGTACTGGACAAGATTCCCACCTGAAGGA
TCCAAAAGCACACCTCCTCATCCATCTTGTGAATTCAGATGGAAAGACTATTGCCCAAAA
GTTTTTAGGGCTTTAAGGATGTTATTCAAAGTGGATGCAGCTGATTATATGCTGTCTATT
TGTGGCAATGACGCCCTTCGGGAGCTATGCTCCCCAGGAAAAAGCGGAAGCTTCTTCTAC
TTGACAAATGATGATAGATACATGATTAAGACAATGAAGAAGGCAGAAGTGAAAGTGCTT
CTAAGGATGCTGCATGCCTATTTCAATCATGTTCGTGCTTTTGAGAACACCCTTATGACT
AAGTATTTCGGCCTGCATTGTGTTAAGCTAAACGGACCAGCACAGAAGAAGGTACGATTT
GTTATAATGGGGAATCTCTTCCGCACTGATTATACAATTCATAGACGATTCGACTTGAAA
GGATCAACGTTTGGCCGGATGACAGATAAGCCAGAATCAGAGATCGATGCAACCACAACT
CTGAAAGACCTTGACCTCAACTTTATATTCATGTTACCAAAGACATGGTTTCAAGAATTC
CGCAGGCAAGTTGATAGGGACTGTGAACTACTGGAACAAGAGAGAGTGATGGACTACAGC
CTTTTAGTTGGTCTTCATTTTAGGGAAGCAAGTATCACTGGAGACCAAACTCCTTCTGGT
TGTAGAACACCTACTGATAATGAAGGATTGGAAGATGGATCAGTTCCTCGTCTTTCTCGA
TCAGATAGGGATCAATTGCATCTTGATCCAGCAGGGTGGGCTAGCATAAGTTTGGGTATA
AACATGCCCGCACGAGTTGAAAGGACAGAGAGGAAAAATGACTTAGACTTTCAGTTAGTA
GGAGAACCAACAGGGGAGTTTTATGATGTGATATTATTTTTTGGAATCATAGACATACTT
CAGGACTATGACATTACCAAAAAGCTTGAGCATGCATACAAATCTATCCAATGTGACCCC
AACTCTATCTCAGCTGTCGATCCAAAGGCGTACTCAAGGCGTTTTCGTGATTACATATTC
AAAGTTTTTACAGAGGACACTTAG

Peptide Sequence

PEP ID

XP_016458531.1
PEP Infomation

PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 6-like [Nicotiana tabacum]
Sequence

MKAWEATVKKTQAVARKRANTIFGTYGPSQAEEEIIDQLDPENDNEGHASGEIYHSERFL
PNGDYYSGYWVDNFPHGHGKYWWTDGCMYLGDWFRGKKMGKGTFSWPSGAMYEGNFKSGY
MDGEGTYMAPNGDSFRGSWVMNLKHGHGVKEYANGDCYDGEWSRGLQEGHGKYTWKNGNC
YVGEWKNGVICGKGKMCWTNENVYEGNWEDGVPKGNGTFRWADGSLYIGNWSKEPNEHNG
TFYPSGSLLQGGNLDWDPQQVYYTDLMECTICPNEKVSILPSQKKLAVWRSAKAAENNVR
PRRMSVDGRIDAAPVDREFGRTRLSDCAGTPPNISYLDDAIAGSQEHDGYIRGSPIRLPK
SAKRQGETISKGHKNYELMLNLQLGIRHSVGRPGPAPSLDLKSSAFDPKEKYWTRFPPEG
SKSTPPHPSCEFRWKDYCPKVFRALRMLFKVDAADYMLSICGNDALRELCSPGKSGSFFY
LTNDDRYMIKTMKKAEVKVLLRMLHAYFNHVRAFENTLMTKYFGLHCVKLNGPAQKKVRF
VIMGNLFRTDYTIHRRFDLKGSTFGRMTDKPESEIDATTTLKDLDLNFIFMLPKTWFQEF
RRQVDRDCELLEQERVMDYSLLVGLHFREASITGDQTPSGCRTPTDNEGLEDGSVPRLSR
SDRDQLHLDPAGWASISLGINMPARVERTERKNDLDFQLVGEPTGEFYDVILFFGIIDIL
QDYDITKKLEHAYKSIQCDPNSISAVDPKAYSRRFRDYIFKVFTEDT

Transcript Sequence

Gene sequence data has not been registered.